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  5. Len_g33081

Len_g33081 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33081
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT3G51060 SRS1, STY1 Lateral root primordium (LRP) protein-related 0.03 OrthoFinder output from all 47 species
Ala_g24739 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27015 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043005 SRS5 SRS-type transcription factor & original description: CDS=39-1118 0.03 OrthoFinder output from all 47 species
Azfi_s0861.g090073 SHI SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g09484 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.02 OrthoFinder output from all 47 species
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
Msp_g01643 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20607 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30774 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!