Smo141637 (PACid_15411246)


Aliases : PACid_15411246

Description : 27.1.3.10 RNA.processing.3 end processing.CstF50 Transducin/WD40 repeat-like superfamily protein CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781) BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|525304 : 108.0


Gene families : OG_01_0008728 (Gene family) Phylogenetic Tree(s): OG0008728_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo141637
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Solyc12g038540.2.1 Solyc12g038540.2 27.1.3.10 RNA.processing.3 end processing.CstF50... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 173 207
No external refs found!