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  5. Len_g32557

Len_g32557


Description : component *(COX6b) of cytochrome c oxidase complex & original description: none


Gene families : OG0001692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g32557
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT1G22450 ATCOX6B2, COX6B cytochrome C oxidase 6B 0.04 OrthoFinder output from all 47 species
Als_g02862 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Als_g61464 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Aop_g19318 No alias component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0388.g067601 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Cre06.g304350 ATCOX6B2, COX6B Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
LOC_Os03g27290.1 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g42910.1 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.02 OrthoFinder output from all 47 species
Msp_g28261 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g24245 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.05 OrthoFinder output from all 47 species
Ore_g11226 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010062 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Tin_g27353 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e001884_P002 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 37 97
No external refs found!