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  5. Len_g32492

Len_g32492 (NPR4, ATNPR4)


Aliases : NPR4, ATNPR4

Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g32492

Target Alias Description ECC score Gene Family Method Actions
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G45110 ATNPR3, NPR3 NPR1-like protein 3 0.06 OrthoFinder output from all 47 species
Dde_g05353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g56200.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.03 OrthoFinder output from all 47 species
LOC_Os01g72020.1 BOP2, LOC_Os01g72020 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species
Nbi_g04874 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06921 ATNPR3, NPR3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62749 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015877 NPR4, ATNPR4 not classified & original description: CDS=1341-1838 0.03 OrthoFinder output from all 47 species
Sam_g07933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069310.3.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.02 OrthoFinder output from all 47 species
Solyc07g044980.3.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.03 OrthoFinder output from all 47 species
Tin_g17466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 67 109
IPR002110 Ankyrin_rpt 299 377
IPR021094 NPR1/NIM1-like_C 397 509
No external refs found!