AMTR_s00012p00103290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.56

Description : Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG_01_0000043 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000043_tree ,
OG_02_0003873 (LandPlants) Phylogenetic Tree(s): OG_02_0003873_tree ,
OG_03_0002371 (SeedPlants) Phylogenetic Tree(s): OG_03_0002371_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00103290
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 Archaeplastida
AT2G27330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.12 Archaeplastida
AT3G46020 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.06 Archaeplastida
AT5G06210 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
AT5G59865 No alias No description available 0.03 Archaeplastida
GSVIVT01038128001 No alias Glycine-rich RNA-binding protein 4, mitochondrial... 0.01 Archaeplastida
Gb_37118 No alias RNA editing factor (ORRM) 0.03 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
MA_14910g0010 No alias No annotation 0.06 Archaeplastida
MA_77292g0010 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
MA_872107g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_23410V3.1 No alias glycine-rich RNA-binding protein 3 0.02 Archaeplastida
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.08 Archaeplastida
Pp3c7_6560V3.1 No alias cold, circadian rhythm, and RNA binding 1 0.01 Archaeplastida
Smo140819 No alias RNA processing.organelle machineries.RNA... 0.06 Archaeplastida
Smo406315 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.06 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e012278_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e018330_P004 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.05 Archaeplastida
Zm00001e035491_P001 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Zm00001e040294_P001 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 LandPlants
MA_14910g0010 No alias No annotation 0.05 LandPlants
MA_77292g0010 No alias RNA editing factor (ORRM) 0.03 LandPlants
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 SeedPlants
MA_14910g0010 No alias No annotation 0.05 SeedPlants
MA_77292g0010 No alias RNA editing factor (ORRM) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 32 98
No external refs found!