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  5. Len_g32315

Len_g32315 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : phytochrome photoreceptor *(PHY) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g32315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00079190 HY3, OOP1, PHYB,... External stimuli response.temperature.temperature... 0.02 OrthoFinder output from all 47 species
Aob_g02397 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38669 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0313.g064222 FHY2, HY8, PHYA, FRE1 temperature sensor protein *(PHY-B) & original... 0.04 OrthoFinder output from all 47 species
Dde_g26723 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09261 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29042 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09246 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09219 No alias phytochrome photoreceptor *(PHY) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16277 No alias temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g059870.4.1 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.04 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20479 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001462_P001 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013654 PAS_2 66 181
IPR013515 Phytochrome_cen-reg 406 579
IPR003018 GAF 215 393
No external refs found!