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  5. Len_g31511

Len_g31511


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g31511
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Aspi01Gene34213.t1 Aspi01Gene34213 BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26917 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
MA_10428386g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g15539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 429 471
IPR000315 Znf_B-box 18 59
No external refs found!