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  5. Len_g31415

Len_g31415


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g31415

Target Alias Description ECC score Gene Family Method Actions
Aob_g24120 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01890.t1 Aspi01Gene01890 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G037100.1 Ceric.13G037100 not classified & original description: pacid=50635930... 0.04 OrthoFinder output from all 47 species
Ceric.13G037500.1 Ceric.13G037500 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016132 No alias pectin methylesterase & original description: CDS=1-684 0.02 OrthoFinder output from all 47 species
Sam_g10266 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 120 399
No external refs found!