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  5. Len_g31407

Len_g31407 (ERD4)


Aliases : ERD4

Description : not classified & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g31407
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
Azfi_s0373.g067190 ERD4 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0795.g087273 ERD4 not classified & original description: CDS=84-998 0.03 OrthoFinder output from all 47 species
Cba_g26928 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G019000.1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z193300.1 Ceric.1Z193300 not classified & original description: pacid=50634950... 0.03 OrthoFinder output from all 47 species
Cre13.g579400 No alias CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g07879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12509 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_317011g0010 HYP1, ATHYP1 CSC1-like protein HYP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g084330.3.1 Solyc06g084330 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 2 86
No external refs found!