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  5. Len_g30942

Len_g30942


Description : regulatory protein *(UBA1/2) of UBP1 activity & original description: none


Gene families : OG0000537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30942

Target Alias Description ECC score Gene Family Method Actions
AT3G56860 UBA2A UBP1-associated protein 2A 0.03 OrthoFinder output from all 47 species
Adi_g095091 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Adi_g102699 UBA2A regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Aop_g01275 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Aop_g07973 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Cba_g07579 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G048800.1 Ceric.06G048800 regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G072400.1 Ceric.10G072400 regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Dac_g13861 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Dde_g00607 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06784 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033516001 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037491001 UBA2A UBP1-associated protein 2A OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g20949 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
MA_129986g0010 No alias UBP1-associated protein 2B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_287080g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_3634858g0010 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp2g22090.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g08960.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g09357 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ore_g01993 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Ore_g07696 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Ore_g11270 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015184 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023148 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Sam_g16812 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Solyc01g008970.4.1 UBA2A, Solyc01g008970 UBP1-associated protein 2A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g021560.4.1 Solyc02g021560 UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30878 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.04 OrthoFinder output from all 47 species
Spa_g38080 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.05 OrthoFinder output from all 47 species
Tin_g05151 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 160 225
IPR000504 RRM_dom 69 135
No external refs found!