AT4G12240


Description : zinc finger (C2H2 type) family protein


Gene families : OG_01_0003635 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003635_tree ,
OG_02_0004649 (LandPlants) Phylogenetic Tree(s): OG_02_0004649_tree ,
OG_03_0011915 (SeedPlants) Phylogenetic Tree(s): OG_03_0011915_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12240
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
MA_10426984g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_10426984g0010 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
MA_10426984g0010 No alias C2H2 zinc finger transcription factor 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021139 NYN_limkain-b1 187 270
No external refs found!