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  5. Len_g30723

Len_g30723


Description : not classified & original description: none


Gene families : OG0000785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30723

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00209930 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G21560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT1G67780 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.03 OrthoFinder output from all 47 species
AT2G23530 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 0.03 OrthoFinder output from all 47 species
Als_g03213 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Aop_g20889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Aop_g24005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25905.t1 Aspi01Gene25905 component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Ceric.07G054500.1 Ceric.07G054500 not classified & original description: pacid=50627528... 0.07 OrthoFinder output from all 47 species
Ceric.22G043400.1 Ceric.22G043400 not classified & original description: pacid=50614394... 0.05 OrthoFinder output from all 47 species
Ceric.23G067000.1 Ceric.23G067000 component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Cre12.g531350 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g09060 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g33884 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
GSVIVT01036441001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_14005 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09082 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g38243 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
MA_10168157g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_109451g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13607 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g03121 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Ore_g19547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06325 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e011227_P001 Zm00001e011227 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e022617_P002 Zm00001e022617 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 152 248
No external refs found!