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  5. Len_g30539

Len_g30539 (ATPAL1, PAL1)


Aliases : ATPAL1, PAL1

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 ATPAL2, PAL2,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00202590 ATPAL2, PAL2,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00159210 PAL4,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00088930 ATPAL1, PAL1,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.03 OrthoFinder output from all 47 species
Adi_g059368 ATPAL1, PAL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07268 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G045000.1 PAL4, Ceric.35G045000 EC_4.3 carbon-nitrogen lyase & original description:... 0.06 OrthoFinder output from all 47 species
GSVIVT01006148001 PAL4 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01024303001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
LOC_Os02g41680.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007129 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 0.04 OrthoFinder output from all 47 species
Solyc09g007910.4.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Tin_g03458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015157_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 117 589
No external refs found!