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  5. Len_g30472

Len_g30472


Description : not classified & original description: none


Gene families : OG0001027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30472
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT2G38160 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aop_g11863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G009200.1 Ceric.31G009200 not classified & original description: pacid=50574505... 0.03 OrthoFinder output from all 47 species
Dde_g25262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032844001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01033970001 No alias No description available 0.03 OrthoFinder output from all 47 species
Nbi_g03038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g38965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016947_P002 Zm00001e016947 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!