Len_g30346

Description : RKD-type transcription factor & original description: none

Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g30346

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00218190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NIN-like...	0.02	OrthoFinder output from all 47 species
AT5G16100	No alias	unknown protein; Has 30201 Blast hits to 17322 proteins...	0.02	OrthoFinder output from all 47 species
Als_g06352	No alias	germ cell differentiation factor *(RKD) & original...	0.03	OrthoFinder output from all 47 species
Cre03.g149400	No alias	RNA biosynthesis.transcriptional activation.NIN-like...	0.01	OrthoFinder output from all 47 species
Dcu_g41814	No alias	germ cell differentiation factor *(RKD) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01026649001	No alias	RNA biosynthesis.transcriptional activation.NIN-like...	0.02	OrthoFinder output from all 47 species
GSVIVT01038562001	No alias	RNA biosynthesis.transcriptional activation.NIN-like...	0.02	OrthoFinder output from all 47 species
Zm00001e007243_P002	Zm00001e007243	transcription factor (RKD)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003035	RWP-RK_dom	463	510

External Links

No external refs found!