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  5. Len_g30195

Len_g30195 (RIN4)


Aliases : RIN4

Description : regulatory factor *(RIN4) guarded by RPM1/RPS2 activities & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30195
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Adi_g024075 NOI regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aev_g12594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39330.t1 Aspi01Gene39330 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024237 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Cba_g05087 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
GSVIVT01014701001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030113001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g25765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433308g0010 RIN4 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Ore_g44847 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.01 OrthoFinder output from all 47 species
Pnu_g05944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010395 No alias not classified & original description: CDS=1-855 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017753 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Zm00001e011655_P004 RIN4, Zm00001e011655 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Zm00001e036855_P001 Zm00001e036855 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 176 212
No external refs found!