AT4G11380

Description : Adaptin family protein

Gene families : OG_01_0004656 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004656_tree ,
OG_02_0005385 (LandPlants) Phylogenetic Tree(s): OG_02_0005385_tree ,
OG_03_0007627 (SeedPlants) Phylogenetic Tree(s): OG_03_0007627_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G11380

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.01	Archaeplastida
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	Archaeplastida
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	Archaeplastida
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	Archaeplastida
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	Archaeplastida
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.01	LandPlants
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	LandPlants
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	LandPlants
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	LandPlants
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	LandPlants
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.01	SeedPlants
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	SeedPlants
Solyc08g081320.3.1	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	SeedPlants
Zm00001e001693_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	SeedPlants
Zm00001e038184_P001	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	RCA	Interproscan
MF	GO:0030276	clathrin binding	ISS	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	15	533
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	669	772
IPR015151	B-adaptin_app_sub_C	784	891

External Links

No external refs found!

AT4G11380

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation