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  5. Len_g29759

Len_g29759 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29759

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT3G48870 HSP93-III,... Clp ATPase 0.03 OrthoFinder output from all 47 species
Adi_g055207 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aev_g05507 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06018 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09892 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Als_g15718 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06718 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g21747 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04072 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37964 CLPB3, CLPB-P, APG6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04714 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Dac_g14528 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Dcu_g08738 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14780 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17103 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ehy_g21280 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007880001 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01011496001 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Gb_21720 CLPB4, CLPB-M, HSP98.7 organellar chaperone (Clp-p|Clp-m) 0.04 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Len_g59755 CLPB3, CLPB-P, APG6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04908 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Msp_g23938 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Msp_g48913 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12284 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Ore_g13933 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05832 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19463 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022057 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Smo133845 SAG15, CLPD, ERD1 Chaperone protein ClpD1, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Smo174539 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Solyc03g117950.3.1 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Spa_g18708 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38742 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Spa_g40577 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03515 HSP93-V, DCA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10070 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 440 541
IPR019489 Clp_ATPase_C 820 899
IPR004176 Clp_R_dom 187 238
IPR004176 Clp_R_dom 111 163
IPR003959 ATPase_AAA_core 302 414
IPR003959 ATPase_AAA_core 639 814
No external refs found!