1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g29649

Len_g29649 (VLN4, ATVLN4)


Aliases : VLN4, ATVLN4

Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29649

Target Alias Description ECC score Gene Family Method Actions
AT2G29890 VLN1, ATVLN1 villin-like 1 0.04 OrthoFinder output from all 47 species
Aop_g04783 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38086 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035664 VLN4, ATVLN4 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g02237 VLN4, ATVLN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05233 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024752001 VLN1, ATVLN1 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01029237001 VLN4, ATVLN4 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44890.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Msp_g31948 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10560 No alias villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g021420.3.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Tin_g31418 VLN4, ATVLN4 villin acTin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 692 759
IPR007123 Gelsolin-like_dom 338 406
IPR007123 Gelsolin-like_dom 102 181
IPR007123 Gelsolin-like_dom 475 551
IPR007123 Gelsolin-like_dom 218 276
IPR003128 Villin_headpiece 1016 1051
No external refs found!