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  5. Len_g29504

Len_g29504 (ATOEP16-L, OEP16,...)


Aliases : ATOEP16-L, OEP16, OEP16-1, ATOEP16-1

Description : not classified & original description: none


Gene families : OG0001392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29504
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G28900 ATOEP16-L,... outer plastid envelope protein 16-1 0.02 OrthoFinder output from all 47 species
AT4G16160 ATOEP16-S, ATOEP16-2 Mitochondrial import inner membrane translocase subunit... 0.03 OrthoFinder output from all 47 species
Aop_g68997 ATOEP16-S, ATOEP16-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g06100.1 ATOEP16-S, ATOEP16-2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g17400.1 ATOEP16-L,... Outer envelope pore protein 16, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Ore_g01653 ATOEP16-L,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08587 ATOEP16-S, ATOEP16-2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08588 ATOEP16-S, ATOEP16-2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12079 ATOEP16-L,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12644 ATOEP16-S, ATOEP16-2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g060070.3.1 ATOEP16-S,... Outer envelope pore protein 16-2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e001422_P002 ATOEP16-S,... Outer envelope pore protein 16-2, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 81 118
No external refs found!