AT4G10710 (SPT16)


Aliases : SPT16

Description : global transcription factor C


Gene families : OG_01_0003828 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003828_tree ,
OG_02_0004100 (LandPlants) Phylogenetic Tree(s): OG_02_0004100_tree ,
OG_03_0003905 (SeedPlants) Phylogenetic Tree(s): OG_03_0003905_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10710
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00682p00010920 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.FACT... 0.03 Archaeplastida
GSVIVT01031306001 No alias Chromatin organisation.histone chaperone activities.FACT... 0.07 Archaeplastida
LOC_Os04g25550.1 No alias component SPT16 of FACT histone chaperone complex 0.05 Archaeplastida
MA_10430230g0030 No alias component SPT16 of FACT histone chaperone complex 0.04 Archaeplastida
Mp1g28760.1 No alias component SPT16 of FACT histone chaperone complex 0.07 Archaeplastida
Solyc01g101030.4.1 No alias component SPT16 of FACT histone chaperone complex 0.03 Archaeplastida
Zm00001e013464_P001 No alias component SPT16 of FACT histone chaperone complex 0.03 Archaeplastida
AMTR_s00682p00010920 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.FACT... 0.03 LandPlants
GSVIVT01031306001 No alias Chromatin organisation.histone chaperone activities.FACT... 0.06 LandPlants
LOC_Os04g25550.1 No alias component SPT16 of FACT histone chaperone complex 0.03 LandPlants
MA_10430230g0030 No alias component SPT16 of FACT histone chaperone complex 0.02 LandPlants
Mp1g28760.1 No alias component SPT16 of FACT histone chaperone complex 0.03 LandPlants
Zm00001e013464_P001 No alias component SPT16 of FACT histone chaperone complex 0.02 LandPlants
AMTR_s00682p00010920 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone activities.FACT... 0.03 SeedPlants
GSVIVT01031306001 No alias Chromatin organisation.histone chaperone activities.FACT... 0.04 SeedPlants
LOC_Os04g25550.1 No alias component SPT16 of FACT histone chaperone complex 0.02 SeedPlants
MA_10430230g0030 No alias component SPT16 of FACT histone chaperone complex 0.02 SeedPlants
Solyc01g101030.4.1 No alias component SPT16 of FACT histone chaperone complex 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0007346 regulation of mitotic cell cycle RCA Interproscan
BP GO:0008284 positive regulation of cell population proliferation RCA Interproscan
BP GO:0009630 gravitropism RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Interproscan
CC GO:0035101 FACT complex IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013953 FACT_Spt16 555 708
IPR013719 DUF1747 836 921
IPR000994 Pept_M24 208 440
IPR029148 FACT-Spt16_Nlobe 26 190
No external refs found!