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  5. Len_g29120

Len_g29120 (ACA8, AT-ACA8)


Aliases : ACA8, AT-ACA8

Description : P2B-type calcium cation-transporting ATPase *(ACA) & original description: none


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29120

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene22839.t1 ACA9, ATACA9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22840.t1 ACA4, Aspi01Gene22840 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28556.t1 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28561.t1 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46004.t1 ACA2, Aspi01Gene46004 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63775.t1 ATACA10, CIF1,... P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Dac_g18532 ACA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01668 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Len_g28227 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_29075g0010 ACA8, AT-ACA8 Calcium-transporting ATPase 8, plasma membrane-type... 0.02 OrthoFinder output from all 47 species
MA_815867g0010 ATACA10, CIF1, ACA10 Calcium-transporting ATPase 5, plasma membrane-type... 0.02 OrthoFinder output from all 47 species
Msp_g28248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09934 ACA4 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009529 ACA9, ATACA9 not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sam_g34341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 821 898
IPR004014 ATPase_P-typ_cation-transptr_N 124 191
No external refs found!