Len_g28817

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g28817
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Adi_g077316	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17832	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32826	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene06431.t1	Aspi01Gene06431	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene12634.t1	Aspi01Gene12634	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12635.t1	Aspi01Gene12635	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53516.t1	Aspi01Gene53516	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.06G084000.1	Ceric.06G084000	not classified & original description: pacid=50619247...	0.04	OrthoFinder output from all 47 species
Ehy_g16997	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10067279g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10436428g0010	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_161279g0020	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_28097g0010	BCS1	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_296237g0020	BCS1	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_7834209g0010	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g28074	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g33202	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g39245	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e038158_P001	AATP1, Zm00001e038158	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	22	122
IPR003959	ATPase_AAA_core	244	382

External Links

No external refs found!

Len_g28817

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation