Len_g28666 (AtRABA5d, RABA5d)


Aliases : AtRABA5d, RABA5d

Description : not classified & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28666
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 AtRABA6b,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AT2G33870 ArRABA1h RAB GTPase homolog A1H 0.02 OrthoFinder output from all 47 species
Aev_g09261 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01569 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0056.g034200 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=99-740 0.02 OrthoFinder output from all 47 species
Dac_g27746 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03218 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03286 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05302 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g20050.1 RAB-A2C,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os08g41340.1 AtRABA5d,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_113056g0010 AtRABA5a, RABA5a A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g05544 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39855 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04295 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14192 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03300 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00826 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09438 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009470 ATRABA2A,... A-class RAB GTPase & original description: CDS=131-796 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013006 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=103-753 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026297 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=308-952 0.03 OrthoFinder output from all 47 species
Solyc03g079900.3.1 RABA2b,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc06g076450.3.1 RABA2b,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g12437 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02396 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020213_P001 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e027669_P001 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 140
No external refs found!