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  5. Len_g28345

Len_g28345


Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28345

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.03 OrthoFinder output from all 47 species
Aop_g11456 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g33700 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028036001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01035120001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g07329 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g36266 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c2_32510V3.1 RPL18, Pp3c2_32510 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Pp3c2_34080V3.1 RPL18, Pp3c2_34080 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Ppi_g27061 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g24421 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g35041 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g50566 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e031155_P001 Zm00001e031155 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 41 226
No external refs found!