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  5. Len_g28181

Len_g28181 (E2FB, ATE2FB, E2F1)


Aliases : E2FB, ATE2FB, E2F1

Description : E2F-type transcription factor & original description: none


Gene families : OG0001575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28181

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0486.g073417 E2FB, ATE2FB, E2F1 E2F-type transcription factor & original description: CDS=1-1158 0.03 OrthoFinder output from all 47 species
Cre01.g052300 E2FB, ATE2FB, E2F1 RNA biosynthesis.transcriptional activation.E2F/DP... 0.01 OrthoFinder output from all 47 species
Dcu_g07660 E2FB, ATE2FB, E2F1 E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033931001 E2FB, ATE2FB, E2F1 RNA biosynthesis.transcriptional activation.E2F/DP... 0.02 OrthoFinder output from all 47 species
Gb_10097 E2FB, ATE2FB, E2F1 E2F cell cycle interphase transcription factor.... 0.05 OrthoFinder output from all 47 species
Gb_41248 E2FB, ATE2FB, E2F1 E2F cell cycle interphase transcription factor.... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06200.1 E2FB, ATE2FB,... E2F cell cycle interphase transcription factor.... 0.02 OrthoFinder output from all 47 species
MA_25455g0010 ATE2FA, E2F3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g25303 E2FB, ATE2FB, E2F1 E2F-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000136 E2FB, ATE2FB, E2F1 E2F-type transcription factor & original description: CDS=37-687 0.03 OrthoFinder output from all 47 species
Solyc06g074010.3.1 E2FB, ATE2FB,... E2F cell cycle interphase transcription factor.... 0.02 OrthoFinder output from all 47 species
Spa_g44631 ATE2F2, E2FC, ATE2FC E2F-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022665_P002 E2FB, ATE2FB,... E2F cell cycle interphase transcription factor.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 148 211
IPR032198 E2F_CC-MB 226 326
No external refs found!