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  5. Len_g28155

Len_g28155


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Len_g28155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00211770 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Aob_g19940 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008062 RPT3, NPH3, JK218 not classified & original description: CDS=1270-3795 0.06 OrthoFinder output from all 47 species
Azfi_s2832.g113342 DOT3 not classified & original description: CDS=1-471 0.05 OrthoFinder output from all 47 species
Msp_g13181 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Pir_g09759 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ppi_g03108 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 212 497
No external refs found!