AT4G09450


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0017394 (LandPlants) Phylogenetic Tree(s): OG_02_0017394_tree ,
OG_03_0016926 (SeedPlants) Phylogenetic Tree(s): OG_03_0016926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09450
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G19510 RL5, RSM4, ATRL5 RAD-like 5 0.12 Archaeplastida
AT3G10585 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G10595 No alias Duplicated homeodomain-like superfamily protein 0.09 Archaeplastida
AT5G23650 No alias Homeodomain-like transcriptional regulator 0.08 Archaeplastida
AT5G47290 No alias myb family transcription factor 0.04 Archaeplastida
AT5G61620 No alias myb-like transcription factor family protein 0.04 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c15_23110V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019190_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
AT3G10585 No alias Homeodomain-like superfamily protein 0.04 LandPlants
AT3G10585 No alias Homeodomain-like superfamily protein 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 92 136
No external refs found!