AT4G09180


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000051 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000051_tree ,
OG_02_0000668 (LandPlants) Phylogenetic Tree(s): OG_02_0000668_tree ,
OG_03_0000736 (SeedPlants) Phylogenetic Tree(s): OG_03_0000736_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09180
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G10100 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.06 Archaeplastida
GSVIVT01021032001 No alias External stimuli response.light.UV-A/blue... 0.11 Archaeplastida
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
LOC_Os04g28280.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.1 Archaeplastida
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 LandPlants
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.03 LandPlants
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 SeedPlants
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 196 241
No external refs found!