AT4G09100


Description : RING/U-box superfamily protein


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0000773 (SeedPlants) Phylogenetic Tree(s): OG_03_0000773_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09100
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.04 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.06 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.04 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Gb_14785 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g14990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os11g02250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_111727g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_129478g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_167410g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_280399g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_43248g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_63503g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.07 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g105610.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g063110.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027277_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00140p00098680 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT2G42350 No alias RING/U-box superfamily protein 0.03 LandPlants
AT3G10910 No alias RING/U-box superfamily protein 0.05 LandPlants
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 LandPlants
AT4G38140 No alias RING/U-box superfamily protein 0.06 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Gb_04644 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_04645 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_14778 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_14785 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.03 LandPlants
Gb_23066 No alias no hits & (original description: none) 0.02 LandPlants
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 LandPlants
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 LandPlants
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_167410g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_222729g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_391931g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_43248g0010 No alias no hits & (original description: none) 0.04 LandPlants
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_96368g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.04 LandPlants
Solyc01g105610.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc06g063110.3.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.05 LandPlants
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.04 LandPlants
Zm00001e027277_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 84 127
No external refs found!