AT4G08940


Description : Ubiquitin carboxyl-terminal hydrolase family protein


Gene families : OG_01_0001104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001104_tree ,
OG_02_0010094 (LandPlants) Phylogenetic Tree(s): OG_02_0010094_tree ,
OG_03_0008344 (SeedPlants) Phylogenetic Tree(s): OG_03_0008344_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G08940
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Gb_41689 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os09g29760.1 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 Archaeplastida
Smo422954 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.05 Archaeplastida
Solyc01g079430.2.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g074280.1.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.05 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Gb_41689 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 LandPlants
LOC_Os09g29760.1 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 LandPlants
Solyc04g074280.1.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.05 LandPlants
Gb_41689 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 SeedPlants
LOC_Os09g29760.1 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 SeedPlants
Solyc04g074280.1.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.05 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006979 response to oxidative stress IMP Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0015824 proline transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021099 PORR_domain 67 389
No external refs found!