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  5. Len_g26873

Len_g26873 (RPL23AB)


Aliases : RPL23AB

Description : component *(uL23) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g26873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00069970 RPL23AB,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00132520 RPL23AB,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Adi_g005345 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g31538 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g18428 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g65528 RPL23A, RPL23AA, ATRPL23A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G096300.1 RPL23AB, Ceric.14G096300 component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.39 RPL23AB Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre06.g282500 RPL23A, RPL23AA, ATRPL23A Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01025606001 No alias 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g24690.1 RPL23AB, LOC_Os01g24690 component RPL23a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os04g42270.2 RPL23AB, LOC_Os04g42270 component RPL23a of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_10436962g0020 RPL23A, RPL23AA, ATRPL23A component RPL23a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp2g00570.1 RPL23AB component RPL23a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g10039 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g06153 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c12_19360V3.1 RPL23AB, Pp3c12_19360 ribosomal protein L23AB 0.01 OrthoFinder output from all 47 species
Pp3c13_15920V3.1 RPL23AB, Pp3c13_15920 ribosomal protein L23AB 0.01 OrthoFinder output from all 47 species
Pp3c4_8620V3.1 RPL23AB, Pp3c4_8620 ribosomal protein L23AB 0.01 OrthoFinder output from all 47 species
Sam_g06117 No alias component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36745 No alias component *(uL23) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g01808 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g25289 RPL23AB component *(uL23) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e041164_P001 RPL23A, RPL23AA,... component RPL23a of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
InterPro domains Description Start Stop
IPR005633 Ribosomal_L23/L25_N 15 65
IPR013025 Ribosomal_L25/23 74 136
No external refs found!