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  5. Len_g26611

Len_g26611


Description : not classified & original description: none


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g26611
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00138200 evm_27.TU.AmTr_v1... Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Ala_g25235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G029800.1 Ceric.03G029800 not classified & original description: pacid=50572554... 0.03 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_115450g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_394035g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp7g16430.1 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Ppi_g13057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010698 No alias not classified & original description: CDS=200-1438 0.02 OrthoFinder output from all 47 species
Solyc04g078520.3.1 Solyc04g078520 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g11635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 23 232
No external refs found!