Aliases : ATG8F
Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none
Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G21980 | ATG8A, APG8A | Ubiquitin-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Als_g25085 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g31042 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g00128 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030430001 | ATG8C | Vesicle trafficking.autophagosome formation.ATG8/ATG12... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g21590.1 | ATG8C | ATG8 autophagosome ubiquitin-fold protein | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g27314 | ATG8F | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g080590.3.1 | ATG8C, Solyc02g080590 | ATG8 autophagosome ubiquitin-fold protein | 0.02 | OrthoFinder output from all 47 species | |
Spa_g25476 | ATG8D | autophagosome ubiquitin-fold protein *(ATG8) & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006887_P001 | ATG8C, Zm00001e006887 | ATG8 autophagosome ubiquitin-fold protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010463_P001 | ATG8C, Zm00001e010463 | ATG8 autophagosome ubiquitin-fold protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004126 | cytidine deaminase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | HCCA |
BP | GO:0006216 | cytidine catabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006914 | autophagy | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | HCCA |
BP | GO:0009164 | nucleoside catabolic process | IEP | HCCA |
BP | GO:0009972 | cytidine deamination | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | HCCA |
BP | GO:0042454 | ribonucleoside catabolic process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046087 | cytidine metabolic process | IEP | HCCA |
BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | HCCA |
BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | HCCA |
BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
BP | GO:1901658 | glycosyl compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004241 | Atg8-like | 34 | 129 |
No external refs found! |