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  5. Len_g25980

Len_g25980 (CPSAR1, EMB269, ATOBGC)


Aliases : CPSAR1, EMB269, ATOBGC

Description : regulatory GTPase (OBGL) of thylakoid biogenesis & original description: none


Gene families : OG0006728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g25980

Target Alias Description ECC score Gene Family Method Actions
AT5G18570 CPSAR1, EMB269, ATOBGC GTP1/OBG family protein 0.02 OrthoFinder output from all 47 species
Aop_g21160 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ceric.37G033700.1 CPSAR1, EMB269,... regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Ehy_g18182 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47300.1 CPSAR1, EMB269,... Probable GTP-binding protein OBGC1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Lfl_g36755 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
MA_10437260g0010 CPSAR1, EMB269, ATOBGC GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g07105 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ore_g16896 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Pir_g60197 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007234 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Sam_g30139 No alias regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Spa_g26108 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006169 GTP1_OBG_dom 333 494
IPR006073 GTP-bd 497 617
IPR015349 OCT_dom 702 771
No external refs found!