AT4G05000 (VPS28-2, VPS28-1)


Aliases : VPS28-2, VPS28-1

Description : Vacuolar protein sorting-associated protein VPS28 family protein


Gene families : OG_01_0004378 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004378_tree ,
OG_02_0004887 (LandPlants) Phylogenetic Tree(s): OG_02_0004887_tree ,
OG_03_0005884 (SeedPlants) Phylogenetic Tree(s): OG_03_0005884_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05000
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Cre16.g678100 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Pp3c14_20060V3.1 No alias Vacuolar protein sorting-associated protein VPS28 family protein 0.02 Archaeplastida
Solyc02g080270.3.1 No alias component VPS28 of ESCRT-I complex 0.03 Archaeplastida
Mp8g04540.1 No alias component VPS28 of ESCRT-I complex 0.01 LandPlants
Pp3c14_20060V3.1 No alias Vacuolar protein sorting-associated protein VPS28 family protein 0.02 LandPlants
Solyc02g080270.3.1 No alias component VPS28 of ESCRT-I complex 0.03 LandPlants
Solyc02g080270.3.1 No alias component VPS28 of ESCRT-I complex 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex ISS Interproscan
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006810 transport ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007143 Vps28 19 205
No external refs found!