1. Home
  2. Species
  3. Selaginella moellendorfii
  4. Sequence
  5. Smo129226

Smo129226 (PACid_15417108)


Aliases : PACid_15417108

Description : 35.1 not assigned.no ontology ELCH-like (ELC-Like) FUNCTIONS IN: small conjugating protein ligase activity INVOLVED IN: regulation of protein metabolic process, protein modification process, protein transport, post-translational protein modification LOCATED IN: ESCRT I complex CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Tumour susceptibility gene 101 (InterPro:IPR008883), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), Steadiness box (InterPro:IPR017916) BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme/RWD-like protein (TAIR:AT3G12400.1) Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g58640.1 : 282.0


Gene families : OG_01_0002985 (Gene family) Phylogenetic Tree(s): OG0002985_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo129226
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT3G12400 ELC, ATELC Ubiquitin-conjugating enzyme/RWD-like protein 0.02 Gene family
AT5G13860 ELC-Like ELCH-like 0.03 Gene family
Solyc09g065770.1.1 Solyc09g065770.1 35.1 not assigned.no ontology Ubiquitin-conjugating... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008883 UEV_N 39 159
No external refs found!