AT4G04920 (SFR6)


Aliases : SFR6

Description : sensitive to freezing 6


Gene families : OG_01_0006185 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006185_tree ,
OG_02_0006191 (LandPlants) Phylogenetic Tree(s): OG_02_0006191_tree ,
OG_03_0008910 (SeedPlants) Phylogenetic Tree(s): OG_03_0008910_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04920
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002029001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 Archaeplastida
GSVIVT01002224001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.08 Archaeplastida
GSVIVT01004519001 No alias Mediator of RNA polymerase II transcription subunit 16... 0.04 Archaeplastida
Gb_16787 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 Archaeplastida
LOC_Os10g35560.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.05 Archaeplastida
MA_10435759g0010 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 Archaeplastida
Solyc02g078520.4.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.07 Archaeplastida
Zm00001e004466_P003 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
GSVIVT01002029001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 LandPlants
GSVIVT01002224001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.08 LandPlants
Gb_16787 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 LandPlants
LOC_Os10g35560.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.04 LandPlants
MA_176669g0010 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 LandPlants
Mp4g19580.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 LandPlants
Solyc02g078520.4.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.07 LandPlants
GSVIVT01002029001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 SeedPlants
LOC_Os10g35560.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 SeedPlants
MA_176669g0010 No alias component MED16 of tail module of MEDIATOR transcription... 0.02 SeedPlants
Solyc02g078520.4.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IMP Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
BP GO:0009631 cold acclimation IMP Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
BP GO:0010104 regulation of ethylene-activated signaling pathway IMP Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0016926 protein desumoylation RCA Interproscan
BP GO:0032922 circadian regulation of gene expression IMP Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0048586 regulation of long-day photoperiodism, flowering IMP Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0050665 hydrogen peroxide biosynthetic process RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
BP GO:1901672 positive regulation of systemic acquired resistance IMP Interproscan
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!