AT4G04670


Description : Met-10+ like family protein / kelch repeat-containing protein


Gene families : OG_01_0007030 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007030_tree ,
OG_02_0008900 (LandPlants) Phylogenetic Tree(s): OG_02_0008900_tree ,
OG_03_0010653 (SeedPlants) Phylogenetic Tree(s): OG_03_0010653_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G04670
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cre14.g626634 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.05 Archaeplastida
GSVIVT01012726001 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.06 Archaeplastida
LOC_Os07g33100.1 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.07 Archaeplastida
MA_10429104g0010 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.02 Archaeplastida
MA_10433025g0010 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.03 Archaeplastida
Mp2g18470.1 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.06 Archaeplastida
Pp3c9_15020V3.1 No alias Met-10+ like family protein / kelch repeat-containing protein 0.02 Archaeplastida
Solyc05g055610.4.1 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.06 Archaeplastida
Zm00001e035100_P003 No alias no hits & (original description: none) 0.05 Archaeplastida
GSVIVT01012726001 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.06 LandPlants
LOC_Os07g33100.1 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.05 LandPlants
MA_10429104g0010 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.02 LandPlants
Mp2g18470.1 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.05 LandPlants
Solyc05g055610.4.1 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.05 LandPlants
Zm00001e035100_P003 No alias no hits & (original description: none) 0.03 LandPlants
GSVIVT01012726001 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.06 SeedPlants
LOC_Os07g33100.1 No alias tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.05 SeedPlants
MA_10429104g0010 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.01 SeedPlants
Solyc05g055610.4.1 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.05 SeedPlants
Zm00001e035100_P003 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006310 DNA recombination RCA Interproscan
BP GO:0006869 lipid transport RCA Interproscan
BP GO:0010332 response to gamma radiation RCA Interproscan
BP GO:0031591 wybutosine biosynthetic process ISS Interproscan
BP GO:0032204 regulation of telomere maintenance RCA Interproscan
BP GO:0043247 telomere maintenance in response to DNA damage RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003827 tRNA_yW-synthesising 5 209
IPR030382 MeTrfase_TRM5/TYW2 736 936
IPR006652 Kelch_1 375 416
No external refs found!