1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g24771

Len_g24771 (SHM4)


Aliases : SHM4

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24771
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262120 SHM4,... Amino acid metabolism.biosynthesis.serine... 0.05 OrthoFinder output from all 47 species
AT4G13930 SHM4 serine hydroxymethyltransferase 4 0.04 OrthoFinder output from all 47 species
Ala_g06666 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g08717 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014711 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Cba_g21731 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.16G071800.1 SHM4, Ceric.16G071800 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.37G043000.1 STM, SHM1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre06.g293950 SHM4 Amino acid metabolism.biosynthesis.serine... 0.02 OrthoFinder output from all 47 species
Dcu_g23927 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01009226001 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.05 OrthoFinder output from all 47 species
LOC_Os11g26860.1 SHM4, LOC_Os11g26860 Serine hydroxymethyltransferase 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g01520 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Msp_g00555 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Nbi_g04285 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Smo166496 SHM4 Amino acid metabolism.biosynthesis.serine... 0.07 OrthoFinder output from all 47 species
Solyc05g053810.3.1 SHM4, Solyc05g053810 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g04332 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Spa_g08792 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g30099 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Tin_g12386 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e021483_P001 SHM4, Zm00001e021483 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 15 414
No external refs found!