Len_g24642


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24642

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270380 OTP86,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
Adi_g002434 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018634 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19301 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70773.t1 OTP84, Aspi01Gene70773 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030532 No alias not classified & original description: CDS=1-2100 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035318 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1986 0.03 OrthoFinder output from all 47 species
Azfi_s0583.g078513 No alias not classified & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39859 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03133 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29945 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo76236 No alias Pentatricopeptide repeat-containing protein ELI1,... 0.03 OrthoFinder output from all 47 species
Tin_g19239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 596 640
IPR002885 Pentatricopeptide_repeat 463 503
IPR002885 Pentatricopeptide_repeat 261 308
IPR002885 Pentatricopeptide_repeat 164 207
IPR002885 Pentatricopeptide_repeat 696 743
IPR002885 Pentatricopeptide_repeat 337 363
IPR002885 Pentatricopeptide_repeat 770 795
IPR002885 Pentatricopeptide_repeat 236 258
IPR002885 Pentatricopeptide_repeat 365 390
IPR002885 Pentatricopeptide_repeat 565 588
IPR002885 Pentatricopeptide_repeat 135 154
IPR002885 Pentatricopeptide_repeat 437 462
No external refs found!