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  5. Len_g24597

Len_g24597 (AtTMN7, TMN7)


Aliases : AtTMN7, TMN7

Description : not classified & original description: none


Gene families : OG0001040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24597
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT2G24170 No alias Endomembrane protein 70 protein family 0.02 OrthoFinder output from all 47 species
AT3G13772 AtTMN7, TMN7 transmembrane nine 7 0.02 OrthoFinder output from all 47 species
AT5G10840 No alias Endomembrane protein 70 protein family 0.06 OrthoFinder output from all 47 species
Adi_g024073 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g057397 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09413 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09579 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38738 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G093100.1 AtTMN7, TMN7,... not classified & original description: pacid=50636593... 0.03 OrthoFinder output from all 47 species
Ceric.31G017400.1 AtTMN7, TMN7,... not classified & original description: pacid=50574278... 0.05 OrthoFinder output from all 47 species
Ceric.34G048200.1 AtTMN7, TMN7,... not classified & original description: pacid=50624107... 0.03 OrthoFinder output from all 47 species
Ceric.35G001000.1 AtTMN7, TMN7,... not classified & original description: pacid=50580768... 0.05 OrthoFinder output from all 47 species
Cre10.g439850 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g03388 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24214 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09919 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016851001 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26109 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g37160.1 AtTMN7, TMN7,... Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38530.1 LOC_Os09g38530 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_177756g0010 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp4g15200.1 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g15555 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04770 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15506 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013825 AtTMN7, TMN7 not classified & original description: CDS=324-2243 0.03 OrthoFinder output from all 47 species
Solyc07g005600.4.1 Solyc07g005600 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g006820.4.1 Solyc08g006820 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g18187 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003963_P001 Zm00001e003963 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e003964_P001 Zm00001e003964 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022515_P003 Zm00001e022515 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e034890_P002 Zm00001e034890 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039875_P001 Zm00001e039875 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 1 503
No external refs found!