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  5. Len_g24583

Len_g24583


Description : not classified & original description: none


Gene families : OG0000762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24583

Target Alias Description ECC score Gene Family Method Actions
AT1G19950 HVA22H HVA22-like protein H (ATHVA22H) 0.02 OrthoFinder output from all 47 species
Adi_g086550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69314 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0030.g024337 No alias not classified & original description: CDS=1-1800 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025377 No alias not classified & original description: CDS=275-1012 0.04 OrthoFinder output from all 47 species
Lfl_g16518 HVA22J not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09150 HVA22J not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 30 108
No external refs found!