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  5. Len_g24317

Len_g24317 (ERD4)


Aliases : ERD4

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24317

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
AT4G15430 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.25 No alias CSC1-like protein ERD4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009282001 RXW8 Solute transport.channels.OSCA calcium-permeable channel 0.04 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Pir_g18723 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 186 345
IPR032880 Csc1/OSCA1-like_N 6 164
IPR003864 CSC1/OSCA1-like_7TM 356 569
No external refs found!