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  5. Len_g24015

Len_g24015 (COI1)


Aliases : COI1

Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24015
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.03 OrthoFinder output from all 47 species
Ala_g02239 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ala_g11817 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Aop_g11731 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Aop_g13268 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Ceric.1Z143900.1 COI1, Ceric.1Z143900 not classified & original description: pacid=50567868... 0.05 OrthoFinder output from all 47 species
Ceric.1Z144000.1 COI1, Ceric.1Z144000 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Dac_g07329 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os04g32460.1 AFB2, LOC_Os04g32460 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Lfl_g03292 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Mp6g02750.1 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Msp_g15130 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Ore_g26263 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Sam_g19822 No alias component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Spa_g18002 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Spa_g26581 COI1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12321 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 13 51
IPR041101 Transp_inhibit 72 117
No external refs found!