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  5. Len_g23792

Len_g23792


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23792

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00232350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
Adi_g086474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g13468 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13978.t1 Aspi01Gene13978 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15558.t1 Aspi01Gene15558 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40712.t1 Aspi01Gene40712 histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45547.t1 Aspi01Gene45547 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45547.t2 Aspi01Gene45547 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49323.t1 Aspi01Gene49323 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63285.t1 Aspi01Gene63285 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G014800.1 Ceric.23G014800 histone demethylase *(KDM3) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g07685 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17375 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50090 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15776 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13906 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17510 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g082400.4.1 Solyc02g082400 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Solyc08g065800.1.1 Solyc08g065800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g48969 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20393 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010541_P001 Zm00001e010541 histone demethylase (KDM3) 0.02 OrthoFinder output from all 47 species
Zm00001e025393_P001 Zm00001e025393 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 536 636
No external refs found!