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  5. Len_g23672

Len_g23672 (CAM3, acam-3)


Aliases : CAM3, acam-3

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23672

Target Alias Description ECC score Gene Family Method Actions
Ala_g08329 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28698 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g64189 ATCAL5, CAM2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64882 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64983.t1 ACAM-6, CAM6,... calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03495 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19236 ATCAL5, CAM2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018070001 CML11 Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ppi_g08845 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56917 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001501_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.01 OrthoFinder output from all 47 species
Zm00001e009213_P001 ACAM-2, CAM5,... Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e024051_P001 ACAM-2, CAM5,... Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e038302_P001 ACAM-4, CAM4,... Calmodulin-related protein OS=Petunia hybrida... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 151 214
IPR002048 EF_hand_dom 80 141
No external refs found!