AT4G02930


Description : GTP binding Elongation factor Tu family protein


Gene families : OG_01_0001561 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001561_tree ,
OG_02_0005338 (LandPlants) Phylogenetic Tree(s): OG_02_0005338_tree ,
OG_03_0006935 (SeedPlants) Phylogenetic Tree(s): OG_03_0006935_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02930
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.16 Archaeplastida
Gb_17545 No alias EF-Tu translation elongation factor 0.13 Archaeplastida
Gb_29040 No alias EF-Tu translation elongation factor 0.02 Archaeplastida
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.23 Archaeplastida
MA_58335g0010 No alias EF-Tu translation elongation factor 0.15 Archaeplastida
Mp1g03870.1 No alias EF-Tu translation elongation factor 0.04 Archaeplastida
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.07 Archaeplastida
Pp3c21_1500V3.1 No alias GTP binding Elongation factor Tu family protein 0.09 Archaeplastida
Pp3c23_5580V3.1 No alias GTP binding Elongation factor Tu family protein 0.05 Archaeplastida
Smo153081 No alias Protein biosynthesis.organelle translation... 0.08 Archaeplastida
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.1 Archaeplastida
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.08 Archaeplastida
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.18 Archaeplastida
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.17 Archaeplastida
Zm00001e022880_P001 No alias EF-Tu translation elongation factor 0.04 Archaeplastida
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 LandPlants
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.14 LandPlants
Gb_17545 No alias EF-Tu translation elongation factor 0.12 LandPlants
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.23 LandPlants
MA_58335g0010 No alias EF-Tu translation elongation factor 0.13 LandPlants
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.06 LandPlants
Pp3c20_17410V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 LandPlants
Pp3c21_1500V3.1 No alias GTP binding Elongation factor Tu family protein 0.08 LandPlants
Pp3c23_5580V3.1 No alias GTP binding Elongation factor Tu family protein 0.05 LandPlants
Smo153081 No alias Protein biosynthesis.organelle translation... 0.07 LandPlants
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.09 LandPlants
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.07 LandPlants
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.17 LandPlants
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.15 LandPlants
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 SeedPlants
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.14 SeedPlants
Gb_17545 No alias EF-Tu translation elongation factor 0.12 SeedPlants
LOC_Os03g63410.1 No alias EF-Tu translation elongation factor 0.23 SeedPlants
MA_58335g0010 No alias EF-Tu translation elongation factor 0.13 SeedPlants
Solyc06g008940.4.1 No alias EF-Tu translation elongation factor 0.08 SeedPlants
Solyc09g073000.3.1 No alias EF-Tu translation elongation factor 0.07 SeedPlants
Zm00001e006373_P001 No alias EF-Tu translation elongation factor 0.17 SeedPlants
Zm00001e011649_P001 No alias EF-Tu translation elongation factor 0.15 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Interproscan
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0008270 zinc ion binding IDA Interproscan
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
MF GO:0050897 cobalt ion binding IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 65 258
IPR004161 EFTu-like_2 282 353
IPR004160 Transl_elong_EFTu/EF1A_C 359 452
No external refs found!