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  5. Len_g23542

Len_g23542


Description : not classified & original description: none


Gene families : OG0000323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23542
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g082554 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ala_g10487 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Ala_g25817 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03614 HSD4, AtHSD4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g24528 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g02874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01710 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g07316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20206 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aop_g20431 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aop_g35336 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aop_g69356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58179.t1 Aspi01Gene58179 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene58180.t1 Aspi01Gene58180 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009791 No alias not classified & original description: CDS=435-1445 0.03 OrthoFinder output from all 47 species
Cba_g10274 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Cba_g13886 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g76991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G074100.1 Ceric.03G074100 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ceric.13G034800.1 Ceric.13G034800 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dcu_g01080 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.08 OrthoFinder output from all 47 species
Dcu_g01168 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g09776 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g12120 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Dde_g02722 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ehy_g00857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02425 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ehy_g03383 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Ehy_g14251 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_06706 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_10045 HSD4, AtHSD4 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_16076 No alias ketosphinganine reductase 0.04 OrthoFinder output from all 47 species
Gb_18259 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_18260 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36213 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_36220 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10216834g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10431393g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_115712g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18262g0020 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18495g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_29607g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_66037g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_681548g0010 HSD1, ATHSD1 3-dehydrosphinganine reductase TSC10B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_776612g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9332825g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g05610 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Msp_g07597 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Nbi_g28961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24573 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g26408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00767 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Ppi_g04371 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Ppi_g10976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32644 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.08 OrthoFinder output from all 47 species
Ppi_g62734 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013206 No alias not classified & original description: CDS=130-408 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022772 No alias not classified & original description: CDS=245-1243 0.03 OrthoFinder output from all 47 species
Sam_g13230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13563 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Spa_g28867 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Spa_g29325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00592 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Tin_g14743 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 47 243
No external refs found!