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  5. Len_g23493

Len_g23493


Description : not classified & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23493

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G11080 No alias HMG (high mobility group) box protein 0.04 OrthoFinder output from all 47 species
AT4G23800 No alias HMG (high mobility group) box protein 0.02 OrthoFinder output from all 47 species
Als_g44054 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000553.19 NFD03, HMGB3, NFD3 FACT complex subunit SSRP1 OS=Vicia faba 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.9 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.6 NFD2, HMG BETA... No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g15810.1 LOC_Os02g15810 High mobility group B protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g27294 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40555 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Tin_g00083 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Tin_g03032 HMGB6 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Tin_g45467 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e010305_P004 NFD2, HMG BETA... HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 113.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!